Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

Genes Targeted by hsa-mir-573 in HSCC Head-Neck Chung Cluster 7 Table contains all genes in the HSCC Head-Neck Chung cluster number 7. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-573 27067 STAU2 staufen, RNA binding protein, homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:11371] T 23199 KIAA0182 KIAA0182 [Source:HGNC Symbol;Acc:28979] P T 1805 DPT dermatopontin [Source:HGNC Symbol;Acc:3011] zzz999 10120 ACTR1B ARP1 actin-related protein 1 homolog B, centractin beta (yeast) [Source:HGNC Symbol;Acc:168] T 55737 VPS35 vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:13487] zzz999 54899 PXK PX domain containing serine/threonine kinase [Source:HGNC Symbol;Acc:23326] zzz999 5930 RBBP6 retinoblastoma binding protein 6 [Source:HGNC Symbol;Acc:9889] zzz999 3059 HCLS1 hematopoietic cell-specific Lyn substrate 1 [Source:HGNC Symbol;Acc:4844] zzz999 23078 KIAA0564 KIAA0564 [Source:HGNC Symbol;Acc:29071] zzz999 1024 CDK8 cyclin-dependent kinase 8 [Source:HGNC Symbol;Acc:1779] zzz999 3070 HELLS helicase, lymphoid-specific [Source:HGNC Symbol;Acc:4861] T 8799 PEX11B peroxisomal biogenesis factor 11 beta [Source:HGNC Symbol;Acc:8853] zzz999 8936 WASF1 WAS protein family, member 1 [Source:HGNC Symbol;Acc:12732] zzz999 55930 MYO5C myosin VC [Source:HGNC Symbol;Acc:7604] T 5727 PTCH1 patched 1 [Source:HGNC Symbol;Acc:9585] zzz999 261734 NPHP4 nephronophthisis 4 [Source:HGNC Symbol;Acc:19104] T 4801 NFYB nuclear transcription factor Y, beta [Source:HGNC Symbol;Acc:7805] P T 202018 TAPT1 transmembrane anterior posterior transformation 1 [Source:HGNC Symbol;Acc:26887] zzz999 754 PTTG1IP pituitary tumor-transforming 1 interacting protein [Source:HGNC Symbol;Acc:13524] T 5993 RFX5 regulatory factor X, 5 (influences HLA class II expression) [Source:HGNC Symbol;Acc:9986] zzz999 4179 CD46 CD46 molecule, complement regulatory protein [Source:HGNC Symbol;Acc:6953] T 51018 RRP15 ribosomal RNA processing 15 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:24255] T 36 ACADSB acyl-CoA dehydrogenase, short/branched chain [Source:HGNC Symbol;Acc:91] zzz999 51741 WWOX WW domain containing oxidoreductase [Source:HGNC Symbol;Acc:12799] zzz999 6093 ROCK1 Rho-associated, coiled-coil containing protein kinase 1 [Source:HGNC Symbol;Acc:10251] T 23461 ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5 [Source:HGNC Symbol;Acc:35] zzz999 6605 SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:HGNC Symbol;Acc:11109] zzz999 7181 NR2C1 nuclear receptor subfamily 2, group C, member 1 [Source:HGNC Symbol;Acc:7971] zzz999 7978 MTERF mitochondrial transcription termination factor [Source:HGNC Symbol;Acc:21463] zzz999 9583 ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 [Source:HGNC Symbol;Acc:14573] zzz999 23321 TRIM2 tripartite motif containing 2 [Source:HGNC Symbol;Acc:15974] T 3487 IGFBP4 insulin-like growth factor binding protein 4 [Source:HGNC Symbol;Acc:5473] zzz999 51752 ERAP1 endoplasmic reticulum aminopeptidase 1 [Source:HGNC Symbol;Acc:18173] T 4602 MYB v-myb myeloblastosis viral oncogene homolog (avian) [Source:HGNC Symbol;Acc:7545] P T 23253 ANKRD12 ankyrin repeat domain 12 [Source:HGNC Symbol;Acc:29135] zzz999 7594 ZNF43 zinc finger protein 43 [Source:HGNC Symbol;Acc:13109] T 57180 ACTR3B ARP3 actin-related protein 3 homolog B (yeast) [Source:HGNC Symbol;Acc:17256] zzz999 7105 TSPAN6 tetraspanin 6 [Source:HGNC Symbol;Acc:11858] zzz999 8904 CPNE1 copine I [Source:HGNC Symbol;Acc:2314] zzz999 27147 DENND2A DENN/MADD domain containing 2A [Source:HGNC Symbol;Acc:22212] zzz999 10206 TRIM13 tripartite motif containing 13 [Source:HGNC Symbol;Acc:9976] zzz999 6595 SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:HGNC Symbol;Acc:11098] zzz999 5495 PPM1B protein phosphatase, Mg2+/Mn2+ dependent, 1B [Source:HGNC Symbol;Acc:9276] zzz999 3242 HPD 4-hydroxyphenylpyruvate dioxygenase [Source:HGNC Symbol;Acc:5147] zzz999 3455 IFNAR2 interferon (alpha, beta and omega) receptor 2 [Source:HGNC Symbol;Acc:5433] zzz999 23683 PRKD3 protein kinase D3 [Source:HGNC Symbol;Acc:9408] zzz999 6945 MLX MAX-like protein X [Source:HGNC Symbol;Acc:11645] zzz999 51742 ARID4B AT rich interactive domain 4B (RBP1-like) [Source:HGNC Symbol;Acc:15550] zzz999 6938 TCF12 transcription factor 12 [Source:HGNC Symbol;Acc:11623] zzz999 23122 CLASP2 cytoplasmic linker associated protein 2 [Source:HGNC Symbol;Acc:17078] zzz999 474343 SPIN2B spindlin family, member 2B [Source:HGNC Symbol;Acc:33147] zzz999 7072 TIA1 TIA1 cytotoxic granule-associated RNA binding protein [Source:HGNC Symbol;Acc:11802] T 23247 KIAA0556 KIAA0556 [Source:HGNC Symbol;Acc:29068] zzz999 9988 DMTF1 cyclin D binding myb-like transcription factor 1 [Source:HGNC Symbol;Acc:14603] T 91949 COG7 component of oligomeric golgi complex 7 [Source:HGNC Symbol;Acc:18622] zzz999 8881 CDC16 cell division cycle 16 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:1720] zzz999 8545 CGGBP1 CGG triplet repeat binding protein 1 [Source:HGNC Symbol;Acc:1888] zzz999 5378 PMS1 PMS1 postmeiotic segregation increased 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:9121] zzz999 5950 RBP4 retinol binding protein 4, plasma [Source:HGNC Symbol;Acc:9922] zzz999 65243 ZNF643 zinc finger protein 643 [Source:HGNC Symbol;Acc:28053] zzz999 8720 MBTPS1 membrane-bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:15456] zzz999 223 ALDH9A1 aldehyde dehydrogenase 9 family, member A1 [Source:HGNC Symbol;Acc:412] zzz999 7369 UMOD uromodulin [Source:HGNC Symbol;Acc:12559] zzz999 7844 RNF103 ring finger protein 103 [Source:HGNC Symbol;Acc:12859] zzz999 79184 BRCC3 BRCA1/BRCA2-containing complex, subunit 3 [Source:HGNC Symbol;Acc:24185] T 11120 BTN2A1 butyrophilin, subfamily 2, member A1 [Source:HGNC Symbol;Acc:1136] zzz999 594 BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide [Source:HGNC Symbol;Acc:987] T 93034 NT5C1B 5'-nucleotidase, cytosolic IB [Source:HGNC Symbol;Acc:17818] T 9451 EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 [Source:HGNC Symbol;Acc:3255] zzz999 8493 PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D [Source:HGNC Symbol;Acc:9277] zzz999 6885 MAP3K7 mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:6859] P T 284323 ZNF780A zinc finger protein 780A [Source:HGNC Symbol;Acc:27603] zzz999 7771 ZNF285 zinc finger protein 285 [Source:HGNC Symbol;Acc:13079] T 55213 RCBTB1 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 [Source:HGNC Symbol;Acc:18243] T

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.